-论文成果
已发表SCI论文13篇（总影响因子超过100），专著1篇，专利2项。以第一、共同第一作者或共同通讯作者发表论文8篇，包含3篇CNS子刊、2篇SCI一区top、1篇SCI二区top和2篇SCI三区文章（*为共同第一作者，*为通讯作者）：
1. Cai Y, Cao H*, Wang F, Zhang Y, Kapranov P* (2022) Complex genomic patterns of abasic sites in mammalian DNA revealed by a high-resolution SSiNGLe-AP method. Nature Communications 13: 5868 (共同通讯，Nature子刊，IF 17，期刊生物方法学领域亮点文章)
2. Cao H#, Salazar-Garcia L#, Gao F, Wahlestedt T, Wu CL, Han X, Cai Y, Xu D, Wang F, Tang L, Ricciardi N, Cai D, Wang H, Chin MPS, Timmons JA, Wahlestedt C*, Kapranov P* (2019) Novel approach reveals genomic landscapes of single-strand DNA breaks with nucleotide resolution in human cells. Nature Communications 10: 5799 (Nature子刊，IF 17，期刊当月亮点文章、仅一周时间就跻身生命科学领域2019年热文榜五十佳)
3. Cao H, Wahlestedt C*, Kapranov P* (2018) Strategies to Annotate and Characterize Long Noncoding RNAs: Advantages and Pitfalls. Trends in Genetics 34: 704-721 (Cell子刊，IF 11)
4. Liu X#, Liu Y#, Huang P#, Ma Y#, Qing Z#, Tang Q#, Cao H#, Cheng P, Zheng Y, Yuan Z, Zhou Y, Liu J, Tang Z, Zhuo Y, Zhang Y, Yu L, Huang J, Yang P, Peng Q, Zhang J*, Huang S*. (2017) The Genome of Medicinal Plant Macleaya cordata Provides New Insights into Benzylisoquinoline Alkaloids Metabolism. Molecular Plant 10: 975-989 (共同一作，SCI 一区top，IF 24，首个罂粟科植物基因组，该工作受到邓兴旺院士的高度评价)
5. Cao H, Xu D, Cai Y, Han X, Tang L, Gao F, Qi Y, Cai D, Wang H, Ri M, Antonets D, Vyatkin Y, Chen Y, You X, Wang F, Nicolas E, Kapranov P* (2021) Very long intergenic non-coding (vlinc) RNAs directly regulate multiple genes in cis and trans. BMC Biology 19: 108 (SCI 一区top，IF 7.4)
6. Cao H, Kapranov P* (2022) Methods to Analyze the Non-Coding RNA Interactome-Recent Advances and Challenges. Frontiers in Genetics 13: 857759 (SCI三区, IF 4)
7. Cao H, Zhang Y, Cai Y, Tang L, Gao F, Xu D, Kapranov P* (2022) Hotspots of single-strand DNA "breakome" are enriched at transcriptional start sites of genes. Frontiers in Molecular Biosciences 9: 895795 (SCI三区, IF 6)
8. Cao H, Pang E, Lin K* (2016) Hierarchical Map of Orthologous Genomic Regions Reconstructed from Two Closely Related Genomes: Cucumber Case Study. The Plant Genome 9(3) (SCI二区top, IF 4)
9. Chen Y#, Qi F#*, Gao F, Cao H, Xu D, Salehi-Ashtiani K, Kapranov P* (2021) Hovlinc is a recently evolved class of ribozyme found in human lncRNA. Nature Chemical Biology 17: 601-607 (Nature子刊，IF 17)
10. Lai Y, Yeung CK, Omland K, Pang E, Hao Y, Liao B, Cao H, Zhang B, Yeh C, Hung C, Hung H, Yang M, Liang W, Hsu Y, Yao C, Dong L, Lin K, Li S (2019) Standing genetic variation as the predominant source for adaptation of a songbird. Proc Natl Acad Sci USA 116: 2152-2157 (PNAS, SCI 一区top，IF 12)
11. Lin K, Limpens E, Zhang Z, Ivanov S, Saunders DG, Mu D, Pang E, Cao H, Cha H, Lin T, Zhou Q, Shang Y, Li Y, Sharma T, van Velzen R, de Ruijter N, Aanen DK, Win J, Kamoun S, Bisseling T et al. (2014) Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genetics 10: e1004078 (SCI 二区top，IF 6)
12. Xu D, Cai Y, Tang L, Han X, Gao F, Cao H, Qi F, Kapranov P (2020) A CRISPR/Cas13-based approach demonstrates biological relevance of vlinc class of long non-coding RNAs in anticancer drug response. Scientific Reports 10: 1794 (SCI 三区, IF 5)
13. Huang BH, Pang E, Chen YW, Cao H, Ruan Y, Liao PC (2015) Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae). International Journal of Molecular Sciences 16: 5900-5921 (SCI 二区top，IF 6)
